"""
Alkaloidb 
Argininea 
Ascorbate 
BileAcid 
BloodGrou 
BiotinMet 
Butanoate 
C5-Branche 
CYPMetabo 
Carnitine 
Chondroiti 
ChondSulfDeg 
ChondHepSulfBios 
CitricAci 
CoABiosyn 
CoACatabo 
CysteineM 
D-argand 
D-alanine 
Eicosanoid 
FAE 
FAM 
FAOx 
FolateMet 
Fructosea 
Galactose 
Glutamate 
Glutathion 
Glyceropho 
Glycine-S 
Glycosylph 
Glyoxylate 
HemeBiosy 
Heparansu 
HemeDegra 
Histidine 
Hyaluronan 
IMPBiosyn 
KerSulfBios 
InositolP 
KerSulfDeg 
Keratansu 
Limonenea 
LysineMet 
Methionine 
Miscellane 
N-GlycanB 
N-GlycanD 
NA 
NADMetabo 
Nucleicac 
NucSugMet 
Nuc 
Others 
O-GlycanB 
Nucleotide 
Oxidative 
PentosePh 
Pentosean 
Phenylalan 
Propanoate 
PurineCat 
PyrBios 
PyrCat 
Pyrimidine 
RGroupSy 
PyruvateM 
ROSDetoxi 
Riboflavin 
SalvagePa 
Selenoamin 
Sphingolip 
Starchand 
Stilbene- 
SteroidMe 
Taurinean 
Tetrahydro 
ThiamineM 
Transport- 
Triacylgly 
Tryptophan 
Tyr-Phe- 
Tyrosinem 
Ubiquinone 
Ureacycle 
Valine-Le 
VitaminB1 
VitaminA 
VitaminB6 
VitaminD 


missing images/Alaninean/10165_3SALAASPm_icon.png
missing images/Alaninean/8604_3SALAASPm_icon.png
missing images/Alaninean/64850_AGTim_icon.png
missing images/Alaninean/64902_AGTim_icon.png
missing images/Alaninean/8528_DASPO1p_icon.png
 
python makeNodesEdges.py Aminosugar /Users/jake/local/lux/adipoflux/Aminosugar/Aminosugar.sif
"""

p = open("pathways.txt", "r")

for l in p.readlines():
	pw = l.strip()
	print "python makeNodesEdges.py %s /Users/jake/local/lux/adipoflux/%s/%s.sif" %(pw,pw,pw)
p.close()
